STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cu1989Putative membrane protein. (498 aa)    
Predicted Functional Partners:
cu1990
Putative penicillin-binding protein 1.
  
    0.849
cu1988
Hypothetical protein.
       0.727
cu1992
Putative myo-inositol-1-phosphate synthase.
       0.699
cu0733
Hypothetical protein.
  
     0.683
cu1221
Alpha(1-->6) mannopyranosyltransferase.
  
     0.651
cu0011
Hypothetical protein.
  
     0.629
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
       0.620
cu1994
Putative universal stress protein.
 
     0.601
cu1250
Hypothetical protein.
  
     0.592
cu1238
Putative membrane protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.588
Your Current Organism:
Corynebacterium urealyticum
NCBI taxonomy Id: 504474
Other names: C. urealyticum DSM 7109, Corynebacterium urealyticum ATCC 43042, Corynebacterium urealyticum CIP 103524, Corynebacterium urealyticum DSM 7109, Corynebacterium urealyticum str. DSM 7109, Corynebacterium urealyticum strain DSM 7109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.