STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC32712.1Signal transduction histidine kinase. (651 aa)    
Predicted Functional Partners:
SMC32715.1
Two component transcriptional regulator, LuxR family.
 
  0.965
SMC72547.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.865
SMC32847.1
Two component transcriptional regulator, LuxR family.
  
  0.859
SMC40132.1
Two component transcriptional regulator, LuxR family.
  
  0.858
SMC65609.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.852
SMC46602.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.774
SMC32860.1
Hypothetical protein.
  
     0.667
SMC63342.1
Hpt domain-containing protein.
  
 0.572
SMC35278.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
   0.518
SMC32705.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
       0.501
Your Current Organism:
Cellulophaga tyrosinoxydans
NCBI taxonomy Id: 504486
Other names: C. tyrosinoxydans, Cellulophaga sp. EM41, Cellulophaga tyrosinoxydans Kahng et al. 2009, DSM 21164, KCTC 22297, strain EM41
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.