Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC32025.1 | SMC73579.1 | SAMN05660703_0096 | SAMN05660703_2492 | Hypothetical protein. | Helicase conserved C-terminal domain-containing protein. | 0.596 |
SMC65402.1 | SMC73579.1 | SAMN05660703_2293 | SAMN05660703_2492 | Hypothetical protein. | Helicase conserved C-terminal domain-containing protein. | 0.666 |
SMC73564.1 | SMC73579.1 | SAMN05660703_2491 | SAMN05660703_2492 | Glycosyltransferase involved in cell wall bisynthesis. | Helicase conserved C-terminal domain-containing protein. | 0.791 |
SMC73564.1 | SMC73591.1 | SAMN05660703_2491 | SAMN05660703_2493 | Glycosyltransferase involved in cell wall bisynthesis. | Hypothetical protein. | 0.542 |
SMC73564.1 | polA | SAMN05660703_2491 | SAMN05660703_0347 | Glycosyltransferase involved in cell wall bisynthesis. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.415 |
SMC73579.1 | SMC32025.1 | SAMN05660703_2492 | SAMN05660703_0096 | Helicase conserved C-terminal domain-containing protein. | Hypothetical protein. | 0.596 |
SMC73579.1 | SMC65402.1 | SAMN05660703_2492 | SAMN05660703_2293 | Helicase conserved C-terminal domain-containing protein. | Hypothetical protein. | 0.666 |
SMC73579.1 | SMC73564.1 | SAMN05660703_2492 | SAMN05660703_2491 | Helicase conserved C-terminal domain-containing protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.791 |
SMC73579.1 | SMC73591.1 | SAMN05660703_2492 | SAMN05660703_2493 | Helicase conserved C-terminal domain-containing protein. | Hypothetical protein. | 0.576 |
SMC73579.1 | SMC75977.1 | SAMN05660703_2492 | SAMN05660703_2667 | Helicase conserved C-terminal domain-containing protein. | RNA polymerase Rpb6. | 0.920 |
SMC73579.1 | SMC80724.1 | SAMN05660703_2492 | SAMN05660703_2871 | Helicase conserved C-terminal domain-containing protein. | EF-hand domain pair. | 0.598 |
SMC73579.1 | polA | SAMN05660703_2492 | SAMN05660703_0347 | Helicase conserved C-terminal domain-containing protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.888 |
SMC73579.1 | rpoA | SAMN05660703_2492 | SAMN05660703_2201 | Helicase conserved C-terminal domain-containing protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.921 |
SMC73579.1 | rpoB | SAMN05660703_2492 | SAMN05660703_0015 | Helicase conserved C-terminal domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.924 |
SMC73579.1 | rpoC | SAMN05660703_2492 | SAMN05660703_0014 | Helicase conserved C-terminal domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.729 |
SMC73591.1 | SMC73564.1 | SAMN05660703_2493 | SAMN05660703_2491 | Hypothetical protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.542 |
SMC73591.1 | SMC73579.1 | SAMN05660703_2493 | SAMN05660703_2492 | Hypothetical protein. | Helicase conserved C-terminal domain-containing protein. | 0.576 |
SMC73591.1 | polA | SAMN05660703_2493 | SAMN05660703_0347 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.775 |
SMC75977.1 | SMC73579.1 | SAMN05660703_2667 | SAMN05660703_2492 | RNA polymerase Rpb6. | Helicase conserved C-terminal domain-containing protein. | 0.920 |
SMC75977.1 | rpoA | SAMN05660703_2667 | SAMN05660703_2201 | RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
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