STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC75319.1Hypothetical protein. (149 aa)    
Predicted Functional Partners:
SMC43758.1
Hypothetical protein.
  
     0.570
SMC75290.1
L-alanine-DL-glutamate epimerase.
       0.556
SMC75307.1
7-keto-8-aminopelargonate synthetase.
       0.556
SMC53305.1
Hypothetical protein.
  
     0.516
SMC75276.1
Putative auto-transporter adhesin, head GIN domain.
 
     0.512
SMC38688.1
Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter.
  
     0.508
SMC87043.1
Protein of unknown function.
  
     0.504
SMC87037.1
Protein of unknown function.
  
     0.502
SMC60698.1
Hypothetical protein.
  
     0.478
SMC38073.1
Hypothetical protein.
  
     0.461
Your Current Organism:
Cellulophaga tyrosinoxydans
NCBI taxonomy Id: 504486
Other names: C. tyrosinoxydans, Cellulophaga sp. EM41, Cellulophaga tyrosinoxydans Kahng et al. 2009, DSM 21164, KCTC 22297, strain EM41
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.