Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC74408.1 | SMC83634.1 | SAMN05660703_2567 | SAMN05660703_2924 | 4Fe-4S dicluster domain-containing protein. | Uncaracterized surface protein containing fasciclin (FAS1) repeats. | 0.465 |
SMC83634.1 | SMC74408.1 | SAMN05660703_2924 | SAMN05660703_2567 | Uncaracterized surface protein containing fasciclin (FAS1) repeats. | 4Fe-4S dicluster domain-containing protein. | 0.465 |
SMC83634.1 | SMC83649.1 | SAMN05660703_2924 | SAMN05660703_2926 | Uncaracterized surface protein containing fasciclin (FAS1) repeats. | Enoyl-[acyl-carrier protein] reductase II. | 0.444 |
SMC83634.1 | mnmA | SAMN05660703_2924 | SAMN05660703_2925 | Uncaracterized surface protein containing fasciclin (FAS1) repeats. | tRNA-specific 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.471 |
SMC83649.1 | SMC83634.1 | SAMN05660703_2926 | SAMN05660703_2924 | Enoyl-[acyl-carrier protein] reductase II. | Uncaracterized surface protein containing fasciclin (FAS1) repeats. | 0.444 |
SMC83649.1 | mnmA | SAMN05660703_2926 | SAMN05660703_2925 | Enoyl-[acyl-carrier protein] reductase II. | tRNA-specific 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.799 |
mnmA | SMC83634.1 | SAMN05660703_2925 | SAMN05660703_2924 | tRNA-specific 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | Uncaracterized surface protein containing fasciclin (FAS1) repeats. | 0.471 |
mnmA | SMC83649.1 | SAMN05660703_2925 | SAMN05660703_2926 | tRNA-specific 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | Enoyl-[acyl-carrier protein] reductase II. | 0.799 |