STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL91019.1Cytochrome c family protein. (330 aa)    
Predicted Functional Partners:
GAL89035.1
Putative molybdenum containing oxidoreductase.
   
  0.771
GAL90896.1
Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.709
GAL89572.1
Outer membrane protein RND efflux system precursor.
  
     0.703
GAL89564.1
TonB dependent receptor putative.
  
     0.680
GAL89573.1
Probable Co/Zn/Cd efflux system membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.630
GAL90272.1
PQQ-dependent oxidoreductase.
  
 
  0.541
GAL89575.1
Hypothetical protein.
  
     0.486
GAL89654.1
Hypothetical protein.
  
     0.468
GAL89440.1
Putative transferase.
  
     0.464
GAL89589.1
Hypothetical protein.
 
     0.458
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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