Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAL88888.1 | GAL90846.1 | JCM19538_1877 | JCM19538_904 | DnaJ-like protein DjlA. | Chaperone protein HtpG. | 0.942 |
GAL88888.1 | GAL90957.1 | JCM19538_1877 | JCM19538_1015 | DnaJ-like protein DjlA. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.790 |
GAL88888.1 | dnaK | JCM19538_1877 | JCM19538_1327 | DnaJ-like protein DjlA. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.971 |
GAL88888.1 | groL | JCM19538_1877 | JCM19538_171 | DnaJ-like protein DjlA. | Heat shock protein 60 family chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.774 |
GAL88888.1 | groS | JCM19538_1877 | JCM19538_170 | DnaJ-like protein DjlA. | Heat shock protein 60 family co-chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.529 |
GAL88888.1 | grpE | JCM19538_1877 | JCM19538_835 | DnaJ-like protein DjlA. | Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] | 0.866 |
GAL88888.1 | lon | JCM19538_1877 | JCM19538_2782 | DnaJ-like protein DjlA. | ATP-dependent protease La Type I; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.511 |
GAL90093.1 | GAL90846.1 | JCM19538_834 | JCM19538_904 | Chaperone protein DnaJ. | Chaperone protein HtpG. | 0.937 |
GAL90093.1 | GAL90957.1 | JCM19538_834 | JCM19538_1015 | Chaperone protein DnaJ. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.810 |
GAL90093.1 | dnaK | JCM19538_834 | JCM19538_1327 | Chaperone protein DnaJ. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.994 |
GAL90093.1 | groL | JCM19538_834 | JCM19538_171 | Chaperone protein DnaJ. | Heat shock protein 60 family chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.829 |
GAL90093.1 | groS | JCM19538_834 | JCM19538_170 | Chaperone protein DnaJ. | Heat shock protein 60 family co-chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.574 |
GAL90093.1 | grpE | JCM19538_834 | JCM19538_835 | Chaperone protein DnaJ. | Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] | 0.981 |
GAL90093.1 | lon | JCM19538_834 | JCM19538_2782 | Chaperone protein DnaJ. | ATP-dependent protease La Type I; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.503 |
GAL90717.1 | GAL90846.1 | JCM19538_482 | JCM19538_904 | DnaJ-class molecular chaperone CbpA. | Chaperone protein HtpG. | 0.937 |
GAL90717.1 | GAL90957.1 | JCM19538_482 | JCM19538_1015 | DnaJ-class molecular chaperone CbpA. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.768 |
GAL90717.1 | dnaK | JCM19538_482 | JCM19538_1327 | DnaJ-class molecular chaperone CbpA. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.993 |
GAL90717.1 | groL | JCM19538_482 | JCM19538_171 | DnaJ-class molecular chaperone CbpA. | Heat shock protein 60 family chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.824 |
GAL90717.1 | groS | JCM19538_482 | JCM19538_170 | DnaJ-class molecular chaperone CbpA. | Heat shock protein 60 family co-chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.605 |
GAL90717.1 | grpE | JCM19538_482 | JCM19538_835 | DnaJ-class molecular chaperone CbpA. | Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] | 0.877 |
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