STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL88879.1Hypothetical protein. (126 aa)    
Predicted Functional Partners:
GAL88882.1
Transcriptional regulator.
 
     0.789
GAL88880.1
Alkylhydroperoxidase AhpD core; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.758
GAL90445.1
Hypothetical protein.
  
     0.724
GAL90452.1
Phophatidylinositol-4-phosphate 5-kinase.
  
     0.682
GAL91022.1
Hypothetical protein.
   
   0.640
GAL89705.1
Hypothetical protein.
   
   0.640
GAL89709.1
Hypothetical protein.
   
   0.640
GAL89742.1
Hypothetical protein.
   
   0.640
GAL89134.1
Flavodoxin reductases.
   
 
 0.586
GAL88293.1
Ferredoxin 2Fe-2S.
   
 
 0.571
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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