STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL89176.1Monofunctional biosynthetic peptidoglycan transglycosylase. (785 aa)    
Predicted Functional Partners:
GAL88907.1
Multimodular transpeptidase-transglycosylase.
  
  
 
0.886
GAL91134.1
Cell division protein FtsI.
  
 
 0.860
GAL90424.1
Penicillin-binding protein 2.
  
 
 0.834
GAL88957.1
Hypothetical protein.
    
 
 0.747
GAL90425.1
Rod shape-determining protein RodA; Belongs to the SEDS family.
  
 
 
 0.741
GAL89174.1
Signal peptidase-like protein.
       0.683
GAL89175.1
GldH protein.
       0.683
GAL90565.1
N-acetylmuramoyl-L-alanine amidase.
  
 
 0.678
GAL89886.1
Hypothetical protein.
  
 
 0.670
mraY
phospho-N-acetylmuramoyl-pentapeptide-transferas e; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
  
  
 0.660
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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