STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL87960.11,4-alpha-glucan branching enzyme. (98 aa)    
Predicted Functional Partners:
GAL89019.1
Glucose-1-phosphate adenylyltransferase.
  
 
 0.745
GAL87855.1
Hypothetical protein.
  
 
 0.745
GAL87955.1
Hypothetical protein.
   
   0.691
GAL89022.1
Trehalose synthase.
 
 
 0.539
GAL90904.1
Hypothetical protein.
  
 
 0.536
GAL90368.1
Alpha-amylase.
  
     0.533
GAL89447.1
Glycosyl transferase family 2.
   
 0.485
GAL89024.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.436
GAL87959.1
Dihydrofolate reductase.
       0.433
glgE
Alpha-amylase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
  
 
  0.430
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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