STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL90469.1Hypothetical protein. (285 aa)    
Predicted Functional Partners:
GAL87945.1
(S)-3-O-geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P).
 
  
 0.853
GAL90468.1
Nitrilase.
       0.775
GAL87998.1
Membrane protein putative.
  
    0.700
GAL90428.1
GldB protein.
  
     0.687
GAL90958.1
GldI protein.
  
     0.683
GAL90470.1
Mevalonate kinase.
 
   
 0.675
GAL90317.1
Octaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.675
GAL91104.1
PorT protein.
 
     0.661
GAL89893.1
Hypothetical protein.
  
     0.656
GAL90108.1
Glycolate dehydrogenase subunit GlcD.
 
  
 0.633
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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