STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL88024.1Ferric siderophore transport system periplasmic binding protein TonB. (239 aa)    
Predicted Functional Partners:
GAL90293.1
TPR domain protein.
  
     0.773
GAL90119.1
Hypothetical protein.
  
     0.773
GAL89099.1
Hypothetical protein.
  
  
  0.771
GAL87845.1
Biopolymer transport ExbD protein.
  
     0.767
GAL87846.1
Hypothetical protein.
  
     0.767
GAL90704.1
Biopolymer transport exbD protein.
  
     0.760
GAL88023.1
Hypothetical protein.
 
     0.755
GAL89908.1
Hypothetical protein.
  
     0.723
GAL89682.1
Ferric siderophore transport system periplasmic binding protein TonB.
 
  
  0.716
GAL90185.1
Hypothetical protein.
  
     0.712
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.