STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL90483.1Peptide methionine sulfoxide reductase MsrA. (180 aa)    
Predicted Functional Partners:
GAL90487.1
Peptide methionine sulfoxide reductase MsrB.
 
 0.972
GAL90485.1
Hypothetical protein.
  
 
 0.936
GAL90481.1
L-fuco-beta-pyranose dehydrogenase.
     0.897
GAL90024.1
Peptide methionine sulfoxide reductase MsrB.
 
 0.825
msrA-2
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
    
0.824
GAL90484.1
Selenoprotein O and cysteine-containing homologs.
 
   
 0.811
GAL90482.1
Bll2902 protein.
       0.784
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
  
 0.770
GAL91014.1
Thioredoxin family protein.
    
  0.602
GAL90354.1
Thioredoxin family protein.
    
  0.602
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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