STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL90484.1Selenoprotein O and cysteine-containing homologs. (520 aa)    
Predicted Functional Partners:
GAL90481.1
L-fuco-beta-pyranose dehydrogenase.
 
     0.825
GAL90483.1
Peptide methionine sulfoxide reductase MsrA.
 
   
 0.811
GAL90487.1
Peptide methionine sulfoxide reductase MsrB.
  
  
 0.806
GAL90482.1
Bll2902 protein.
  
    0.790
msrA-2
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.787
GAL90485.1
Hypothetical protein.
  
    0.774
GAL90480.1
Surface antigen (D15) precursor.
       0.541
GAL90479.1
Hypothetical protein.
       0.530
GAL90488.1
Metal-dependent phosphohydrolase HD subdomain.
       0.520
GAL89376.1
Vitamin B12 ABC transporter permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
      0.507
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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