STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL90506.1Hypothetical protein. (135 aa)    
Predicted Functional Partners:
GAL88195.1
Hypothetical protein.
  
     0.602
GAL90752.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
     0.521
GAL88696.1
Hypothetical protein.
  
     0.513
GAL87824.1
Hypothetical protein.
  
     0.508
GAL90681.1
Hypothetical protein.
  
     0.474
GAL89620.1
Hypothetical protein.
  
     0.458
GAL88225.1
G:T/U mismatch-specific uracil/thymine DNA-glycosylase.
  
     0.455
GAL89389.1
Hypothetical protein.
  
     0.451
GAL88252.1
Hypothetical protein.
  
     0.449
GAL88196.1
Hypothetical protein.
  
     0.433
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.