STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL89215.1NADH dehydrogenase subunit 5. (481 aa)    
Predicted Functional Partners:
GAL89256.1
Ferredoxin.
  
 0.999
GAL89216.1
Hypothetical transmembrane protein coupled to NADH-ubiquinone oxidoreductase chain 5 homolog; Belongs to the UPF0753 family.
 
 0.995
GAL90026.1
NADH dehydrogenase.
   
 
 0.908
GAL89217.1
Hypothetical protein.
       0.723
GAL87979.1
Inorganic pyrophosphatase.
  
    0.667
GAL90714.1
Hypothetical protein.
  
     0.527
GAL89222.1
RuBisCO operon transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
   
 0.516
GAL88551.1
Two-component response regulator.
    
 0.509
GAL90494.1
DNA-binding response regulator.
  
 
 
 0.499
GAL90896.1
Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family.
   
    0.491
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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