STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL88394.1Hypothetical protein. (133 aa)    
Predicted Functional Partners:
GAL90573.1
Hypothetical protein.
  
     0.742
GAL89907.1
Hypothetical protein.
  
     0.717
GAL90188.1
Hypothetical protein.
  
     0.703
GAL90857.1
Hypothetical protein.
  
     0.685
GAL88376.1
Hypothetical protein.
  
     0.682
GAL88032.1
Hypothetical protein.
  
     0.681
GAL88366.1
Hypothetical protein.
  
     0.665
GAL88082.1
Hypothetical protein.
  
     0.659
GAL88601.1
Hypothetical protein.
  
     0.656
GAL90881.1
N-acetylmuramoyl-L-alanine amidase AmiB precursor.
  
     0.637
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.