STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL88447.1Rhodanese-like precursor. (338 aa)    
Predicted Functional Partners:
GAL88448.1
Hypothetical protein.
 
     0.900
GAL88441.1
NrfD protein.
 
  
  0.854
GAL88444.1
Hypothetical protein.
 
     0.844
GAL88443.1
Rhodanese-like membrane protein.
 
     0.826
GAL88442.1
Conserved hypothetical protein.
 
    0.823
GAL88438.1
Cytochrome c family protein.
 
     0.813
GAL88439.1
Anaerobic dehydrogenases.
 
  
  0.812
GAL88446.1
Rhodanese-like precursor.
 
    
0.779
GAL90875.1
Putative autotransporter protein.
  
     0.761
GAL90876.1
Internalin-like protein (LPXTG motif) Lmo0331 homolog.
  
     0.731
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.