STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL88659.1Putative periplasmic ATP/GTP-binding protein. (295 aa)    
Predicted Functional Partners:
GAL89776.1
Glycoside hydrolase family 2 sugar binding.
  
     0.531
GAL89763.1
Hypothetical protein.
  
     0.511
GAL90237.1
Putative outer membrane protein.
  
     0.486
GAL89798.1
Myo-inositol 2-dehydrogenase.
  
 
  0.472
GAL88660.1
Hypothetical protein.
       0.468
GAL89759.1
Beta-xylosidase.
  
     0.451
GAL89476.1
D-galactose 1-dehydrogenase.
  
 
  0.435
GAL90067.1
Alginate lyase.
  
     0.427
GAL88657.1
Isochorismate synthase.
  
    0.414
GAL88658.1
ComA operon protein 2.
       0.414
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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