STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL88678.1Predicted rhamnulose-1-phosphate aldolase. (701 aa)    
Predicted Functional Partners:
GAL88676.1
Rhamnulokinase RhaK in alpha-proteobacteria.
 
 
 0.970
GAL88677.1
Predicted L-rhamnose isomerase RhaI.
 
  
  0.964
GAL88675.1
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
  
 
 0.838
GAL88068.1
Glutamate synthase [NADPH] large chain.
     
 0.830
GAL90913.1
enoyl-CoA hydratase.
  
 0.816
GAL90435.1
Xylulose kinase.
  
 
 0.795
GAL89134.1
Flavodoxin reductases.
   
 0.782
GAL89752.1
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose.
 
  
 0.765
lpxC
N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.
  
 0.744
GAL89807.1
Transcriptional regulator of rhamnose utilization.
 
     0.716
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.