STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL89800.1Hypothetical protein. (332 aa)    
Predicted Functional Partners:
GAL89802.1
TonB-dependent receptor.
 
     0.880
GAL89801.1
Hypothetical protein.
 
     0.874
GAL89803.1
Putative outer membrane protein.
 
     0.839
GAL89804.1
TonB-dependent receptor.
 
     0.838
GAL89758.1
Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.765
GAL89759.1
Beta-xylosidase.
  
     0.761
GAL89793.1
Hypothetical glycoside hydrolase.
 
     0.755
GAL89787.1
Putative glycosyslhydrolase; Belongs to the glycosyl hydrolase 2 family.
 
     0.706
GAL89751.1
Type IV pilus biogenesis protein PilO.
  
     0.695
GAL89763.1
Hypothetical protein.
  
     0.693
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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