STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL89550.1Ubiquinone biosynthesis monooxygenase UbiB. (437 aa)    
Predicted Functional Partners:
GAL89551.1
Hypothetical protein.
 
     0.958
GAL89549.1
Hypothetical protein.
 
     0.834
GAL89548.1
Probable oxidoreductase-putative NAD-dependent nucleoside-diphosphate-sugar epimerase.
 
 
 0.739
GAL89539.1
Dehydrogenases.
 
 
   0.677
GAL89547.1
Cryptochrome; Belongs to the DNA photolyase family.
 
     0.598
GAL89543.1
Asl0491 protein.
 
     0.496
GAL89545.1
Cryptochrome; Belongs to the DNA photolyase family.
 
     0.490
GAL89186.1
Porphobilinogen synthase; Belongs to the ALAD family.
    
 0.482
GAL89546.1
Hypothetical protein.
 
     0.478
kmo
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
   
 
 0.470
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.