STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL90287.1hydroxymethylglutaryl-CoA reductase. (438 aa)    
Predicted Functional Partners:
GAL90470.1
Mevalonate kinase.
 
 0.975
GAL90288.1
Hypothetical protein.
 
 0.973
GAL90571.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.914
GAL90471.1
Diphosphomevalonate decarboxylase.
 
 
 0.903
GAL90912.1
3-ketoacyl-CoA thiolase.
 
  
 0.899
GAL90761.1
1,4-dihydroxy-2-naphthoate polyprenyltransferase.
    
 
 0.841
kmo
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
   
  
 0.711
GAL89041.1
Hypothetical protein.
    
 0.489
GAL90014.1
Hypothetical protein.
    
  0.466
GAL88115.1
Dimethylallyltransferase; Belongs to the FPP/GGPP synthase family.
  
 
 0.426
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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