STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL89565.1Hypothetical protein. (130 aa)    
Predicted Functional Partners:
GAL89564.1
TonB dependent receptor putative.
 
     0.906
GAL89570.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
     0.515
GAL88571.1
Conserved hypothetical protein.
  
     0.496
GAL89566.1
Alkyl hydroperoxide reductase subunit C-like protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
       0.485
GAL89567.1
Metallo-beta-lactamase family protein.
 
     0.465
GAL88538.1
Hypothetical protein.
  
     0.461
GAL90876.1
Internalin-like protein (LPXTG motif) Lmo0331 homolog.
  
     0.456
GAL90042.1
Hypothetical protein.
  
     0.435
GAL89572.1
Outer membrane protein RND efflux system precursor.
 
     0.431
GAL88434.1
Kyphoscoliosis.
  
     0.410
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.