Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAL88390.1 | GAL89047.1 | JCM19538_2903 | JCM19538_2036 | Hypothetical protein. | Outer membrane protein. | 0.711 |
GAL88390.1 | GAL89827.1 | JCM19538_2903 | JCM19538_1477 | Hypothetical protein. | Histidine kinase. | 0.488 |
GAL88390.1 | GAL90139.1 | JCM19538_2903 | JCM19538_606 | Hypothetical protein. | Hypothetical protein. | 0.557 |
GAL88390.1 | GAL90141.1 | JCM19538_2903 | JCM19538_608 | Hypothetical protein. | TolA protein. | 0.701 |
GAL88390.1 | GAL90142.1 | JCM19538_2903 | JCM19538_609 | Hypothetical protein. | Hypothetical protein. | 0.742 |
GAL88390.1 | GAL90143.1 | JCM19538_2903 | JCM19538_610 | Hypothetical protein. | Hypothetical protein. | 0.563 |
GAL88390.1 | GAL90726.1 | JCM19538_2903 | JCM19538_491 | Hypothetical protein. | Hypothetical protein. | 0.549 |
GAL89047.1 | GAL88390.1 | JCM19538_2036 | JCM19538_2903 | Outer membrane protein. | Hypothetical protein. | 0.711 |
GAL89047.1 | GAL89080.1 | JCM19538_2036 | JCM19538_2069 | Outer membrane protein. | 8-amino-7-oxononanoate synthase. | 0.585 |
GAL89047.1 | GAL89827.1 | JCM19538_2036 | JCM19538_1477 | Outer membrane protein. | Histidine kinase. | 0.740 |
GAL89047.1 | GAL90139.1 | JCM19538_2036 | JCM19538_606 | Outer membrane protein. | Hypothetical protein. | 0.573 |
GAL89047.1 | GAL90140.1 | JCM19538_2036 | JCM19538_607 | Outer membrane protein. | Internalin putative. | 0.705 |
GAL89047.1 | GAL90141.1 | JCM19538_2036 | JCM19538_608 | Outer membrane protein. | TolA protein. | 0.720 |
GAL89047.1 | GAL90142.1 | JCM19538_2036 | JCM19538_609 | Outer membrane protein. | Hypothetical protein. | 0.701 |
GAL89047.1 | GAL90143.1 | JCM19538_2036 | JCM19538_610 | Outer membrane protein. | Hypothetical protein. | 0.677 |
GAL89047.1 | GAL90726.1 | JCM19538_2036 | JCM19538_491 | Outer membrane protein. | Hypothetical protein. | 0.456 |
GAL89079.1 | GAL89080.1 | JCM19538_2068 | JCM19538_2069 | Hypothetical protein. | 8-amino-7-oxononanoate synthase. | 0.894 |
GAL89079.1 | GAL90140.1 | JCM19538_2068 | JCM19538_607 | Hypothetical protein. | Internalin putative. | 0.554 |
GAL89079.1 | GAL90141.1 | JCM19538_2068 | JCM19538_608 | Hypothetical protein. | TolA protein. | 0.661 |
GAL89079.1 | GAL90142.1 | JCM19538_2068 | JCM19538_609 | Hypothetical protein. | Hypothetical protein. | 0.624 |
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