STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL90177.1Beta-carotene hydroxylase. (134 aa)    
Predicted Functional Partners:
GAL90176.1
Phytoene synthase.
 
 0.983
GAL90178.1
Lycopene beta cyclase.
 
  
 0.979
GAL90175.1
Phytoene dehydrogenase.
 
   
 0.926
GAL90174.1
Transcriptional regulator.
 
     0.761
GAL90552.1
Hypothetical protein.
   
 0.731
kmo
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
   
 0.700
GAL89463.1
Phytoene dehydrogenase.
 
   
 0.683
GAL88017.1
Cytochrome P450 hydroxylase.
   
 0.578
GAL91095.1
linoleoyl-CoA desaturase.
  
 
 0.565
GAL88131.1
Mll0579 protein.
   
 0.554
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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