STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL90051.1Hypothetical protein. (631 aa)    
Predicted Functional Partners:
GAL90048.1
Hypothetical protein.
 
     0.853
GAL90053.1
Hypothetical protein.
 
     0.840
GAL90054.1
Hypothetical protein.
 
     0.811
GAL90050.1
Nudix hydrolase family protein YffH.
       0.773
GAL90231.1
Hypothetical protein.
  
     0.652
GAL88391.1
Hypothetical protein.
  
     0.590
GAL88390.1
Hypothetical protein.
  
     0.536
GAL88869.1
Thiol:disulfide interchange protein TlpA.
  
     0.529
GAL88822.1
Hypothetical protein.
  
     0.524
GAL90049.1
Hypothetical protein.
       0.513
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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