STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL90089.1ABC transporter ATP-binding protein. (311 aa)    
Predicted Functional Partners:
GAL90088.1
Membrane protein putative.
  
 0.970
GAL88726.1
Nitrate ABC transporter ATP-binding protein.
 
    
0.904
GAL88727.1
Nitrate ABC transporter ATP-binding protein.
 
    
0.894
lolD-2
Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
    
0.867
GAL90086.1
Hypothetical protein.
       0.796
GAL90087.1
Potassium efflux system KefA protein.
       0.795
GAL90085.1
Sigma-54 dependent transcriptional regulator.
       0.793
GAL90084.1
Bll6474 protein.
       0.776
GAL88966.1
Putative iron-uptake ABC transport system ATP-binding protein.
    
0.695
GAL90090.1
Hypothetical protein.
       0.465
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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