STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL90111.1Hypothetical protein. (344 aa)    
Predicted Functional Partners:
GAL88153.1
Hypothetical protein-signal peptide and transmembrane prediction.
  
     0.744
GAL88856.1
Cytochrome c551/c552.
  
     0.690
GAL89760.1
Hypothetical protein-transmembrane region and signal peptide prediction.
  
     0.673
GAL88156.1
Putative multi-domain protein.
 
     0.635
GAL88149.1
Hypothetical protein.
  
     0.620
GAL90266.1
Glycosyl hydrolase family 88.
  
  
  0.532
GAL90110.1
Oxidoreductase.
       0.517
GAL90112.1
Hypothetical protein.
       0.429
GAL89799.1
Probable secreted glycosyl hydrolase.
 
     0.420
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.