STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL90891.1Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain. (215 aa)    
Predicted Functional Partners:
GAL90892.1
Cytochrome cbb3 oxidase maturation protein CcoH.
 
     0.924
GAL90893.1
Type cbb3 cytochrome oxidase biogenesis protein CcoG.
 
     0.881
GAL90894.1
Cytochrome c oxidase subunit CcoP.
 
     0.866
GAL90896.1
Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family.
 
     0.863
GAL90898.1
Type cbb3 cytochrome oxidase biogenesis protein CcoI.
 
     0.825
GAL90897.1
Type cbb3 cytochrome oxidase biogenesis protein CcoS.
 
     0.802
GAL90895.1
Hypothetical protein.
 
     0.717
GAL90885.1
Coproporphyrinogen III oxidase oxygen-independent; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
     0.702
GAL90889.1
HlyB/MsbA family ABC transporter.
       0.461
GAL90890.1
Hypothetical protein.
       0.461
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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