STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL90893.1Type cbb3 cytochrome oxidase biogenesis protein CcoG. (474 aa)    
Predicted Functional Partners:
GAL90896.1
Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.974
GAL90894.1
Cytochrome c oxidase subunit CcoP.
    0.957
GAL90892.1
Cytochrome cbb3 oxidase maturation protein CcoH.
 
  
 0.896
GAL90891.1
Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain.
 
     0.881
GAL90897.1
Type cbb3 cytochrome oxidase biogenesis protein CcoS.
 
  
 0.880
GAL90898.1
Type cbb3 cytochrome oxidase biogenesis protein CcoI.
 
  
 0.849
GAL90895.1
Hypothetical protein.
 
    0.809
GAL90885.1
Coproporphyrinogen III oxidase oxygen-independent; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
    0.768
GAL89256.1
Ferredoxin.
 
 
 0.602
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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