STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL90912.13-ketoacyl-CoA thiolase. (396 aa)    
Predicted Functional Partners:
GAL90913.1
enoyl-CoA hydratase.
 
 0.999
GAL89242.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.996
GAL90014.1
Hypothetical protein.
  
 0.967
GAL88900.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.965
GAL90267.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.941
GAL88284.1
glutaryl-CoA dehydrogenase.
   
  0.937
GAL90340.1
methylglutaconyl-CoA hydratase.
  
 0.926
GAL88198.1
Phosphate acetyltransferase.
    
 0.916
GAL90911.1
butyryl-CoA dehydrogenase.
 
  0.914
GAL89832.1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.912
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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