STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK03323.1Hypothetical protein; COG0433 Predicted ATPase. (226 aa)    
Predicted Functional Partners:
AGK03324.1
Hypothetical protein; COG1848 Predicted nucleic acid-binding protein, contains PIN domain.
       0.773
AGK06075.1
COG2380 Uncharacterized protein conserved in bacteria.
   
   0.673
AGK03322.1
Hypothetical protein.
       0.478
AGK03320.1
Hypothetical protein.
       0.464
AGK03321.1
Hypothetical protein.
       0.461
AGK03317.1
Hypothetical protein.
       0.439
AGK03318.1
Hypothetical protein.
       0.439
AGK03319.1
Hypothetical protein.
       0.439
Your Current Organism:
Meiothermus ruber
NCBI taxonomy Id: 504728
Other names: M. ruber DSM 1279, Meiothermus ruber ATCC 35948, Meiothermus ruber DSM 1279
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.