STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK03585.1COG0367 Asparagine synthase (glutamine-hydrolyzing). (636 aa)    
Predicted Functional Partners:
AGK05995.1
COG0067 Glutamate synthase domain 1.
  
 
 0.801
AGK03588.1
Oxidoreductase domain-containing protein; COG0673 Predicted dehydrogenases and related proteins.
 
     0.764
AGK03590.1
COG0438 Glycosyltransferase.
 
     0.759
AGK03589.1
Nucleotide sugar dehydrogenase; COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
    0.747
AGK03587.1
Transferase hexapeptide repeat containing protein; COG0110 Acetyltransferase (isoleucine patch superfamily).
     
 0.738
AGK03584.1
COG0438 Glycosyltransferase.
       0.733
AGK03586.1
Glutamine--scyllo-inositol transaminase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.729
AGK04206.1
COG0527 Aspartokinases; Belongs to the aspartokinase family.
  
 
 0.704
AGK03583.1
COG0367 Asparagine synthase (glutamine-hydrolyzing).
 
    
0.698
argG
COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 0.679
Your Current Organism:
Meiothermus ruber
NCBI taxonomy Id: 504728
Other names: M. ruber DSM 1279, Meiothermus ruber ATCC 35948, Meiothermus ruber DSM 1279
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