STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK03617.1N-acetyltransferase GCN5; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins. (187 aa)    
Predicted Functional Partners:
AGK04568.1
N-acetyltransferase GCN5; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
  
     0.703
AGK05995.1
COG0067 Glutamate synthase domain 1.
   
 
 0.702
AGK04360.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
    
  0.629
AGK03618.1
COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
    0.618
AGK04448.1
COG3877 Uncharacterized protein conserved in bacteria.
  
     0.571
AGK03619.1
COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
    0.524
AGK06151.1
Bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; COG1605 Chorismate mutase.
    
  0.484
AGK05232.1
N-acetyltransferase GCN5; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
 
 
 0.423
AGK06333.1
COG1250 3-hydroxyacyl-CoA dehydrogenase.
    
  0.405
Your Current Organism:
Meiothermus ruber
NCBI taxonomy Id: 504728
Other names: M. ruber DSM 1279, Meiothermus ruber ATCC 35948, Meiothermus ruber DSM 1279
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