STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK03720.1COG2074 2-phosphoglycerate kinase. (476 aa)    
Predicted Functional Partners:
AGK05315.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.756
AGK04969.1
Ig family protein.
  
     0.727
AGK06113.1
Hypothetical protein.
  
     0.691
AGK05461.1
Hypothetical protein.
  
     0.683
AGK04189.1
COG1527 Archaeal/vacuolar-type H+-ATPase subunit C.
  
     0.658
AGK04074.1
COG0723 Rieske Fe-S protein.
  
     0.652
AGK05016.1
COG3584 Uncharacterized protein conserved in bacteria.
  
     0.638
AGK04073.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.636
AGK05232.1
N-acetyltransferase GCN5; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.629
AGK03343.1
E3 binding domain-containing protein; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.
  
     0.620
Your Current Organism:
Meiothermus ruber
NCBI taxonomy Id: 504728
Other names: M. ruber DSM 1279, Meiothermus ruber ATCC 35948, Meiothermus ruber DSM 1279
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