STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK03759.1Hypothetical protein; COG1048 Aconitase A. (196 aa)    
Predicted Functional Partners:
AGK03758.1
Hypothetical protein.
       0.773
AGK03760.1
Hypothetical protein.
       0.773
AGK03754.1
Hypothetical protein.
       0.768
AGK03755.1
Metal dependent phosphohydrolase; COG2206 HD-GYP domain.
       0.768
AGK03756.1
COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
       0.768
AGK03757.1
AAA ATPase; COG3854 Uncharacterized protein conserved in bacteria.
       0.768
AGK03761.1
Hypothetical protein.
       0.752
AGK03762.1
Hypothetical protein.
       0.730
AGK03763.1
S-layer protein; COG0012 Predicted GTPase, probable translation factor.
       0.705
AGK03764.1
Hypothetical protein.
       0.695
Your Current Organism:
Meiothermus ruber
NCBI taxonomy Id: 504728
Other names: M. ruber DSM 1279, Meiothermus ruber ATCC 35948, Meiothermus ruber DSM 1279
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.