STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK03937.1ROK family protein; COG1940 Transcriptional regulator/sugar kinase. (374 aa)    
Predicted Functional Partners:
xylA
COG2115 Xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.941
xylB
Xylulokinase; COG1070 Sugar (pentulose and hexulose) kinases.
  
  
 0.795
AGK04502.1
ROK family protein; COG1940 Transcriptional regulator/sugar kinase.
  
 
  0.786
pgi
COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family.
 
  
 0.763
AGK05970.1
COG0021 Transketolase; Belongs to the transketolase family.
  
 
 0.720
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.701
AGK06213.1
Aldose 1-epimerase; COG2017 Galactose mutarotase and related enzymes.
    
 0.699
AGK05744.1
COG0033 Phosphoglucomutase.
     
 0.688
AGK03509.1
COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
    
  0.645
AGK04888.1
Hypothetical protein.
    
  0.643
Your Current Organism:
Meiothermus ruber
NCBI taxonomy Id: 504728
Other names: M. ruber DSM 1279, Meiothermus ruber ATCC 35948, Meiothermus ruber DSM 1279
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.