STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK03997.1COG2224 Isocitrate lyase. (431 aa)    
Predicted Functional Partners:
AGK05273.1
COG2225 Malate synthase; Belongs to the malate synthase family.
 
 0.999
AGK04458.1
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
   
 
 0.930
AGK05045.1
Hypothetical protein; COG0247 Fe-S oxidoreductase.
     
 0.832
AGK03968.1
COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase.
     
 0.830
AGK05047.1
FAD linked oxidase domain-containing protein; COG0277 FAD/FMN-containing dehydrogenases.
     
 0.826
AGK05658.1
FAD linked oxidase domain-containing protein; COG0277 FAD/FMN-containing dehydrogenases.
     
 0.826
AGK03954.1
COG0277 FAD/FMN-containing dehydrogenases.
     
 0.751
AGK03509.1
COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
     
 0.713
AGK05635.1
FAD linked oxidase domain-containing protein; COG0277 FAD/FMN-containing dehydrogenases.
     
 0.708
AGK04047.1
Hypothetical protein; COG0247 Fe-S oxidoreductase.
     
 0.631
Your Current Organism:
Meiothermus ruber
NCBI taxonomy Id: 504728
Other names: M. ruber DSM 1279, Meiothermus ruber ATCC 35948, Meiothermus ruber DSM 1279
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