STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK04223.1COG2382 Enterochelin esterase and related enzymes. (319 aa)    
Predicted Functional Partners:
AGK06352.1
COG1331 Highly conserved protein containing a thioredoxin domain.
    
   0.744
AGK04221.1
Type 11 methyltransferase; COG0500 SAM-dependent methyltransferases.
       0.713
AGK04222.1
COG0861 Membrane protein TerC, possibly involved in tellurium resistance.
       0.705
ppc
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.
       0.682
AGK03520.1
Endo-1,4-beta-xylanase; COG3693 Beta-1,4-xylanase.
   
   0.668
AGK05095.1
Putative esterase; COG2819 Predicted hydrolase of the alpha/beta superfamily.
 
  
 0.580
AGK05315.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.576
AGK05461.1
Hypothetical protein.
  
     0.561
AGK04073.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
  
  0.556
AGK03522.1
Xylan 1,4-beta-xylosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
    
 0.529
Your Current Organism:
Meiothermus ruber
NCBI taxonomy Id: 504728
Other names: M. ruber DSM 1279, Meiothermus ruber ATCC 35948, Meiothermus ruber DSM 1279
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.