STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK04315.1COG1091 dTDP-4-dehydrorhamnose reductase. (283 aa)    
Predicted Functional Partners:
AGK05767.1
COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.984
AGK05766.1
COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes.
 
 
 0.980
AGK05762.1
Glucose-1-phosphate thymidylyltransferase; COG1209 dTDP-glucose pyrophosphorylase.
 
  
 0.908
AGK03860.1
Glucose-1-phosphate thymidylyltransferase; COG1209 dTDP-glucose pyrophosphorylase.
 
  
 0.883
AGK05777.1
UDP-phosphate galactose phosphotransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.857
AGK04866.1
COG1216 Predicted glycosyltransferases.
 
  
 0.757
AGK05765.1
COG1216 Predicted glycosyltransferases.
 
  
 0.725
AGK04370.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.706
AGK03599.1
NAD-dependent epimerase/dehydratase; COG0451 Nucleoside-diphosphate-sugar epimerases.
 
 0.694
AGK04316.1
Hypothetical protein; COG0533 Metal-dependent proteases with possible chaperone activity.
       0.671
Your Current Organism:
Meiothermus ruber
NCBI taxonomy Id: 504728
Other names: M. ruber DSM 1279, Meiothermus ruber ATCC 35948, Meiothermus ruber DSM 1279
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.