STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK04498.1COG0842 ABC-type multidrug transport system, permease component. (246 aa)    
Predicted Functional Partners:
AGK04499.1
COG1131 ABC-type multidrug transport system, ATPase component.
 
 
  0.967
AGK04496.1
Two component LuxR family transcriptional regulator; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
     0.847
AGK04497.1
Histidine kinase; COG4585 Signal transduction histidine kinase.
 
    0.844
AGK04500.1
1-phosphofructokinase; COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family.
       0.526
AGK05083.1
Hypothetical protein.
  
     0.487
AGK05780.1
Hypothetical protein.
  
     0.476
AGK04375.1
Family 5 extracellular solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
  
  
  0.464
AGK05593.1
Phosphonate ABC transporter substrate-binding protein; COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.
  
  
  0.448
AGK04074.1
COG0723 Rieske Fe-S protein.
  
     0.432
AGK04501.1
Carbohydrate kinase FGGY; COG1070 Sugar (pentulose and hexulose) kinases; Belongs to the FGGY kinase family.
       0.430
Your Current Organism:
Meiothermus ruber
NCBI taxonomy Id: 504728
Other names: M. ruber DSM 1279, Meiothermus ruber ATCC 35948, Meiothermus ruber DSM 1279
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