Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGK04552.1 | AGK04555.1 | K649_06260 | K649_06275 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | 0.961 |
| AGK04552.1 | AGK04556.1 | K649_06260 | K649_06280 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | COG0410 ABC-type branched-chain amino acid transport systems, ATPase component. | 0.550 |
| AGK04552.1 | AGK04557.1 | K649_06260 | K649_06285 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. | 0.517 |
| AGK04552.1 | AGK04558.1 | K649_06260 | K649_06290 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Inner-membrane translocator; COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family. | 0.475 |
| AGK04552.1 | AGK05386.1 | K649_06260 | K649_10470 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | phenylacetate-CoA oxygenase PaaJ; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme. | 0.931 |
| AGK04552.1 | AGK05387.1 | K649_06260 | K649_10475 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | phenylacetate-CoA oxygenase subunit PaaI. | 0.946 |
| AGK04552.1 | AGK05388.1 | K649_06260 | K649_10480 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Phenylacetic acid degradation B; COG3460 Uncharacterized enzyme of phenylacetate metabolism. | 0.901 |
| AGK04552.1 | AGK05920.1 | K649_06260 | K649_13170 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | COG1541 Coenzyme F390 synthetase. | 0.872 |
| AGK04552.1 | AGK06283.1 | K649_06260 | K649_14985 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; COG1012 NAD-dependent aldehyde dehydrogenases. | 0.710 |
| AGK04552.1 | paaA | K649_06260 | K649_10485 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | phenylacetate-CoA oxygenase subunit PaaA. | 0.949 |
| AGK04555.1 | AGK04552.1 | K649_06275 | K649_06260 | Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.961 |
| AGK04555.1 | AGK04556.1 | K649_06275 | K649_06280 | Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | COG0410 ABC-type branched-chain amino acid transport systems, ATPase component. | 0.784 |
| AGK04555.1 | AGK04557.1 | K649_06275 | K649_06285 | Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. | 0.774 |
| AGK04555.1 | AGK04558.1 | K649_06275 | K649_06290 | Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | Inner-membrane translocator; COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family. | 0.777 |
| AGK04555.1 | AGK05386.1 | K649_06275 | K649_10470 | Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | phenylacetate-CoA oxygenase PaaJ; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme. | 0.946 |
| AGK04555.1 | AGK05387.1 | K649_06275 | K649_10475 | Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | phenylacetate-CoA oxygenase subunit PaaI. | 0.955 |
| AGK04555.1 | AGK05388.1 | K649_06275 | K649_10480 | Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | Phenylacetic acid degradation B; COG3460 Uncharacterized enzyme of phenylacetate metabolism. | 0.954 |
| AGK04555.1 | AGK05920.1 | K649_06275 | K649_13170 | Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | COG1541 Coenzyme F390 synthetase. | 0.896 |
| AGK04555.1 | AGK06283.1 | K649_06275 | K649_14985 | Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; COG1012 NAD-dependent aldehyde dehydrogenases. | 0.796 |
| AGK04555.1 | paaA | K649_06275 | K649_10485 | Phenylacetic acid degradation protein PaaD; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | phenylacetate-CoA oxygenase subunit PaaA. | 0.955 |
page 1 of 4