STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK04690.1N-acetyltransferase GCN5; COG0456 Acetyltransferases. (295 aa)    
Predicted Functional Partners:
AGK03780.1
Hypothetical protein; COG4587 ABC-type uncharacterized transport system, permease component.
  
     0.684
AGK04688.1
N-acetyltransferase GCN5; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
 
    0.662
AGK04689.1
N-acetyltransferase GCN5; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
 
    0.661
AGK03781.1
ABC transporter permease; COG3694 ABC-type uncharacterized transport system, permease component.
  
     0.643
AGK03779.1
ABC transporter-like protein; COG4586 ABC-type uncharacterized transport system, ATPase component.
  
     0.530
AGK04691.1
N-acetyltransferase GCN5; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
    0.498
AGK04909.1
COG4586 ABC-type uncharacterized transport system, ATPase component.
  
     0.455
AGK03567.1
Helix-turn-helix type 11 domain-containing protein; COG2378 Predicted transcriptional regulator.
  
     0.441
AGK04687.1
N-acetyltransferase GCN5.
  
    0.421
AGK03427.1
COG0477 Permeases of the major facilitator superfamily.
  
     0.420
Your Current Organism:
Meiothermus ruber
NCBI taxonomy Id: 504728
Other names: M. ruber DSM 1279, Meiothermus ruber ATCC 35948, Meiothermus ruber DSM 1279
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