STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK04712.1Winged helix family two component transcriptional regulator; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (220 aa)    
Predicted Functional Partners:
AGK04713.1
Histidine kinase; COG0642 Signal transduction histidine kinase.
  0.969
AGK04140.1
COG3300 MHYT domain (predicted integral membrane sensor domain).
  
 0.929
AGK03535.1
Histidine kinase; COG0642 Signal transduction histidine kinase.
 
  0.870
AGK03875.1
Histidine kinase; COG0642 Signal transduction histidine kinase.
  
  0.870
AGK04261.1
Histidine kinase; COG0642 Signal transduction histidine kinase.
 
  0.870
AGK04333.1
Histidine kinase; COG0642 Signal transduction histidine kinase.
 
  0.866
AGK03546.1
Histidine kinase; COG0642 Signal transduction histidine kinase.
  
  0.860
AGK04714.1
Histidine kinase; COG0642 Signal transduction histidine kinase.
 
  0.860
AGK04765.1
Histidine kinase; COG0642 Signal transduction histidine kinase.
 
  0.859
AGK04994.1
Histidine kinase; COG0642 Signal transduction histidine kinase.
 
  0.855
Your Current Organism:
Meiothermus ruber
NCBI taxonomy Id: 504728
Other names: M. ruber DSM 1279, Meiothermus ruber ATCC 35948, Meiothermus ruber DSM 1279
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