STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK04821.1Peptidase M20; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases. (453 aa)    
Predicted Functional Partners:
AGK04822.1
Beta-lactamase domain-containing protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
       0.714
AGK04819.1
Hypothetical protein.
       0.578
AGK04820.1
RES domain-containing protein.
       0.578
AGK05909.1
Dihydropyrimidine dehydrogenase subunit B; COG0167 Dihydroorotate dehydrogenase.
  
  0.570
AGK05004.1
COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
  
     0.488
AGK04818.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 
  0.477
AGK04823.1
COG1538 Outer membrane protein.
       0.432
AGK04824.1
COG1538 Outer membrane protein.
       0.432
Your Current Organism:
Meiothermus ruber
NCBI taxonomy Id: 504728
Other names: M. ruber DSM 1279, Meiothermus ruber ATCC 35948, Meiothermus ruber DSM 1279
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