STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK04949.1Rhodanese domain-containing protein; COG0607 Rhodanese-related sulfurtransferase. (220 aa)    
Predicted Functional Partners:
AGK04951.1
Beta-lactamase domain-containing protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
 
0.846
AGK04947.1
Rhodanese domain-containing protein; COG0607 Rhodanese-related sulfurtransferase.
 
 
 
0.830
AGK04948.1
Rhodanese domain-containing protein; COG0607 Rhodanese-related sulfurtransferase.
 
 
 
0.828
AGK04950.1
Rhodanese domain-containing protein; COG0607 Rhodanese-related sulfurtransferase.
 
 
 
0.816
AGK04946.1
Hypothetical protein; COG0730 Predicted permeases.
       0.774
AGK04370.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.682
AGK04952.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
   
 0.590
AGK05121.1
Catechol 2,3 dioxygenase; COG0346 Lactoylglutathione lyase and related lyases.
   
 
  0.475
AGK06152.1
COG1145 Ferredoxin.
    
  0.467
AGK06143.1
COG0031 Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 
 0.427
Your Current Organism:
Meiothermus ruber
NCBI taxonomy Id: 504728
Other names: M. ruber DSM 1279, Meiothermus ruber ATCC 35948, Meiothermus ruber DSM 1279
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