STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK05286.1Periplasmic binding protein/LacI transcriptional regulator; COG1879 ABC-type sugar transport system, periplasmic component. (325 aa)    
Predicted Functional Partners:
AGK05285.1
Inner-membrane translocator; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.997
AGK05284.1
COG1129 ABC-type sugar transport system, ATPase component.
 
 0.996
AGK04505.1
Inner-membrane translocator; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.991
AGK06106.1
Inner-membrane translocator; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.982
AGK06045.1
Inner-membrane translocator; COG4214 ABC-type xylose transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.963
AGK04506.1
COG1129 ABC-type sugar transport system, ATPase component.
 
 0.920
AGK06105.1
COG1129 ABC-type sugar transport system, ATPase component.
 
 0.904
AGK06044.1
COG1129 ABC-type sugar transport system, ATPase component.
 
 0.879
AGK04137.1
CheA signal transduction histidine kinase; COG0643 Chemotaxis protein histidine kinase and related kinases.
  
 
 0.809
AGK04140.1
COG3300 MHYT domain (predicted integral membrane sensor domain).
    
 0.687
Your Current Organism:
Meiothermus ruber
NCBI taxonomy Id: 504728
Other names: M. ruber DSM 1279, Meiothermus ruber ATCC 35948, Meiothermus ruber DSM 1279
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.