STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK05460.1COG1131 ABC-type multidrug transport system, ATPase component. (305 aa)    
Predicted Functional Partners:
AGK03488.1
COG0842 ABC-type multidrug transport system, permease component.
 
 
 
  0.927
AGK05461.1
Hypothetical protein.
 
  0.890
AGK03686.1
COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 0.728
AGK05673.1
COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
  
 
0.674
AGK04276.1
COG0765 ABC-type amino acid transport system, permease component.
 
   
  0.669
AGK04626.1
COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
  
 
0.665
AGK05116.1
COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
  
 
0.636
AGK05674.1
COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
  
 
0.612
AGK05457.1
PHP domain-containing protein; COG1796 DNA polymerase IV (family X).
   
   0.584
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
     0.580
Your Current Organism:
Meiothermus ruber
NCBI taxonomy Id: 504728
Other names: M. ruber DSM 1279, Meiothermus ruber ATCC 35948, Meiothermus ruber DSM 1279
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.