STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK05722.1TRAP dicarboxylate transporter subunit DctM; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component. (434 aa)    
Predicted Functional Partners:
AGK05721.1
Tripartite AtP-independent periplasmic transporter subunit DctQ.
 
 0.985
AGK05720.1
TRAP dicarboxylate transporter subunit DctP; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
  
 0.913
AGK05241.1
Tripartite AtP-independent periplasmic transporter subunit DctQ; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.908
AGK05242.1
TRAP dicarboxylate transporter subunit DctP; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
  
 0.810
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.776
AGK05240.1
TRAP dicarboxylate transporter subunit DctM; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
  
 
0.709
AGK05724.1
COG2049 Allophanate hydrolase subunit 1.
       0.699
AGK03645.1
TRAP dicarboxylate transporter subunit DctP; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
     0.693
AGK03646.1
Tripartite AtP-independent periplasmic transporter subunit DctQ; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
     0.634
AGK06283.1
Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; COG1012 NAD-dependent aldehyde dehydrogenases.
     
 0.602
Your Current Organism:
Meiothermus ruber
NCBI taxonomy Id: 504728
Other names: M. ruber DSM 1279, Meiothermus ruber ATCC 35948, Meiothermus ruber DSM 1279
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